Search results for "Cation binding"

showing 10 items of 11 documents

Functionalization of Porphyrins: Mechanistic Insights, Conformational Studies, and Structural Characterizations

2006

The condensation of 3-chloromethylbenzoyl chloride with three atropisomers of meso-5,10,15,20-tetrakis(2-aminophenyl)porphyrin (TAPP) is reported, followed by the reaction of the anion of diethyl malonate to prepare various strapped porphyrins. According to two different geometries of the straps, the resulting preorganization of the hanging ethoxycarbonyl groups is more or less adapted to the coordination of cations such as lanthanides. The conformational study, as well as the X-ray structures of three strapped porphyrins, demonstrate that among the three atropisomers investigated in this work, only two of them lead to strapped porphyrins in which an ethoxycarbonyl group is directed towards…

Cation bindingAtropisomer010405 organic chemistryStereochemistryOrganic Chemistry010402 general chemistry[ CHIM ] Chemical Sciences01 natural sciencesPorphyrin0104 chemical sciencesDiethyl malonatechemistry.chemical_compoundchemistryPolymer chemistry[CHIM]Chemical SciencesSurface modificationPhysical and Theoretical ChemistryComputingMilieux_MISCELLANEOUSEuropean Journal of Organic Chemistry
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A Versatile and Convenient Method for the Functionalization of Porphyrins

2001

International audience; The condensation of 3-(chloromethyl)benzoyl chloride with different atropisomers of meso-(tetra-o-aminophenyl)porphyrin (TAPP), followed by the reaction of a series of nucleophilic reagents leads, among others, to precursors of biomimetic models of heme proteins such as cytochrome c oxidase (CcO). This synthesis can also be applied as an efficient two-step reaction to obtain highly functionalized porphyrin derivatives potentially useful for cation binding.

Cation bindingAtropisomerHemeproteinPorphyrinsChemistryEnzyme modelsOrganic ChemistryPorphyrinCombinatorial chemistry[ CHIM ] Chemical SciencesHeme proteinschemistry.chemical_compoundBenzoyl chlorideNucleophileReagentCationspolycyclic compounds[CHIM]Chemical SciencesOrganic chemistrySurface modificationPhysical and Theoretical ChemistryOxidoreductases
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Resorcinarene Bis-Thiacrowns: Prospective Host Molecules for Silver Encapsulation

2012

Mixed-donor atom tetramethoxy resorcinarene bis-thiacrown hosts, in which the crown unit contains both hard oxygen and soft sulfur donor atoms, were synthesized for soft metal cation binding. The binding properties were investigated both in solution and in the solid state by NMR spectroscopy and X-ray crystallography. It was found that the resorcinarene bis-thiacrowns were able to complex silver cations with remarkable affinity forming readily 1:2 host–guest complexes in solution. The solid state structures also revealed that the bis-thiacrowns form silver complexes in an unanticipated endo- and exo-cavity fashion within the same host molecule. Both the solution and solid state studies indi…

Cation bindingChemistryStereochemistryOrganic ChemistryBinding propertiesSupramolecular chemistrychemistry.chemical_elementGeneral ChemistryNuclear magnetic resonance spectroscopyResorcinareneBiochemistrySulfurAtomPolymer chemistryMoleculeta116Chemistry - An Asian Journal
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Divalent Cations Reduce the pH Sensitivity of OmpF Channel Inducing the PKA Shift of Key Acidic Residues

2011

In contrast to the highly-selective channels of neurophysiology employing mostly the exclusion mechanism, different factors account for the selectivity of large channels. Elucidation of these factors is essential for understanding the permeation mechanisms in ion channels and their regulation in vivo. The interaction between divalent cations and a protein channel, the bacterial porin OmpF, has been investigated paying attention to the channel selectivity and its dependence on the solution pH. Unlike the experiments performed in salts of monovalent cations, the channel is now practically insensitive to pH, being anion selective all over the pH range considered. Electrostatic calculations bas…

Cation bindingMolecular modelCations DivalentStatic ElectricityInorganic chemistryBiophysicsPorinsGeneral Physics and AstronomyIonDivalentMagnesiumAmino AcidsPhysical and Theoretical ChemistryTransport iònicIon channelchemistry.chemical_classificationCanals iònicsChemistryHydrogen-Ion ConcentrationPermeationPolyelectrolyteProtein Structure TertiaryKineticsIon channelsThermodynamicsSelectivityProtein BindingBiophysical Journal
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Resorcinarene bis-crown silver complexes and their application as antibacterial Langmuir-Blodgett films

2012

Silver complexes of a cation binding supramolecular host, resorcinarene bis-crown (CNBC5) with propyl, nonyl, decyl and undecyl alkyl chains were investigated by NMR titration, picrate extraction and single crystal X-ray diffraction. Binding studies showed that both 1 : 1 and 1 : 2 (host-Ag(+)) complexes are present in solution with only a slight effect of the lower rim alkyl chain length on the binding constants (log K 4.0-4.2 for 1 : 2 complexes). Solid state complexes of the resorcinarene bis-crowns bearing either C(3) or C(11) chains were obtained. Single crystal X-ray analyses showed that both derivatives bind silver ions by metal-arene and Ag···O coordination from the crown ether brid…

Cation bindingSilverPhenylalaninePicrateInorganic chemistrySupramolecular chemistryCrystallography X-RayBiochemistryLangmuir–Blodgett filmchemistry.chemical_compoundCoordination ComplexesPolymer chemistryAmphiphileEscherichia coliPhysical and Theoretical Chemistryta116Escherichia coli InfectionsAlkylCrown etherchemistry.chemical_classificationMolecular StructureOrganic ChemistryResorcinareneAnti-Bacterial AgentschemistryCalixarenesOrganic & Biomolecular Chemistry
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Damming an electronic energy reservoir: ion-regulated electronic energy shuttling in a [2]rotaxane

2021

We demonstrate the first example of bidirectional reversible electronic energy transfer (REET) between the mechanically bonded components of a rotaxane. Our prototypical system was designed such that photoexcitation of a chromophore in the axle results in temporary storage of electronic energy in a quasi-isoenergetic “reservoir” chromophore in the macrocycle. Over time, the emissive state of the axle is repopulated from this reservoir, resulting in long-lived, delayed luminescence. Importantly, we show that cation binding in the cavity formed by the mechanical bond perturbs the axle chromophore energy levels, modulating the REET process, and ultimately providing a luminescence read-out of c…

Cation binding[PHYS.PHYS.PHYS-OPTICS]Physics [physics]/Physics [physics]/Optics [physics.optics]RotaxaneMaterials scienceMechanical bond010405 organic chemistryluminesenssiMolecular sensorGeneral ChemistryChromophore010402 general chemistryPhotochemistry7. Clean energy01 natural sciences0104 chemical sciencesIonPhotoexcitationChemistrysupramolekulaarinen kemia[CHIM]Chemical Sciencesvalokemia[PHYS.PHYS.PHYS-CHEM-PH]Physics [physics]/Physics [physics]/Chemical Physics [physics.chem-ph]Luminescence
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Cation binding resorcinarene bis-crowns: the effect of lower rim alkyl chain length on crystal packing and solid lipid nanoparticles

2012

A group of seven resorcinarene bis-crown ethers (CNBC5) with two polyether bridges at the upper rim and either propyl, butyl, pentyl, heptyl, nonyl, decyl or undecyl groups at the lower rim were synthesized and their binding properties with Cs+ were investigated by NMR titration. The bis-crowns form 1:2 complexes with Cs+ with binding constants of logK 4–5. Crystal structures of bis-crowns and their Cs+ and K+ complexes were studied and different packing motifs were found depending on the alkyl chain length. Short ethyl, propyl and butyl alkyl chains gave a layer or pillar packing where the polar and non-polar regions cannot be distinguished, whereas longer pentyl and decyl chains formed bi…

Cation bindingkaliumStereochemistryydinmagneettinen resonanssiCyclohexane conformationsolid lipid nanoparticleamphiphileCrystal structureCatalysisCrystalcesiumAmphiphilesupramolekyylikemiaMaterials Chemistrykiinteä lipidipartikkelisupramolekulaarinen kemiaMoleculemacrocyclic compoundta116Alkylkaliksareeniitsejärjestäytyminenchemistry.chemical_classificationresorcinareneChemistryGeneral Chemistrycaesiumself-assemblyResorcinarenekompleksiCrystallographynuclear magnetic resonanceamfifiilimakrosyklinen yhdistecalixarenecomplexröntgenkristallografiaresorsinareeni
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Anion-driven encapsulation of cationic guests inside pyridine[4]arene dimers

2019

Pyridine[4]arenes have previously been considered as anion binding hosts due to the electron-poor nature of the pyridine ring. Herein, we demonstrate the encapsulation of Me4N+ cations inside a dimeric hydrogen-bonded pyridine[4]arene capsule, which contradicts with earlier assumptions. The complexation of a cationic guest inside the pyridine[4]arene dimer has been detected and studied by multiple gas-phase techniques, ESI-QTOF-MS, IRMPD, and DT-IMMS experiments, as well as DFT calculations. The comparison of classical resorcinarenes with pyridinearenes by MS and NMR experiments reveals clear differences in their host–guest chemistry and implies that cation encapsulation in pyridine[4]arene…

Cation bindingmassaspektrometriaanionitDimerpyridinearenes010402 general chemistryDFT calculations01 natural sciencesFull Research Paperdft calculationsIonlcsh:QD241-441chemistry.chemical_compoundlcsh:Organic chemistryPolymer chemistryPyridinesupramolekulaarinen kemiaresorcinarenesInfrared multiphoton dissociationcation bindingAnion bindinglcsh:Science010405 organic chemistryChemistrytiheysfunktionaaliteoriaOrganic ChemistryCationic polymerizationkationit5470104 chemical sciences3. Good healthChemistryion mobility mass spectrometrymacrocycleslcsh:QBeilstein Journal of Organic Chemistry
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Alkali metal mediated resorcarene capsules: An ESI-FTICRMS study on gas-phase structure and cation binding of tetraethyl resorcarene and its per-meth…

2002

AbstractElectrospray ionization Fourier transform ion cyclotron resonance mass spectrometry (ESI-FTICRMS) with additional ab initio calculations were used to examine the alkali metal cation binding selectivity (i.e., molecular recognition) and host properties of tetraethyl resorcarene (1) and its per-methylated derivative (2). The significance of intramolecular hydrogen bonding for the crown conformation was demonstrated. The presence of intramolecular flip-flop hydrogen bonding in 1 was confirmed both with calculations and in ND3-exchange experiments. All the alkali metal cations formed host–guest complexes by docking inside the cavity of the host. Complexation with the larger cations, esp…

Models MolecularSpectrometry Mass Electrospray IonizationCation bindingFourier AnalysisHydrogen bondChemistryStereochemistryElectrospray ionizationMolecular ConformationHydrogen BondingAlkaliesIon cyclotron resonance spectrometryMethylationFourier transform ion cyclotron resonanceMolecular recognitionMetalsStructural BiologyIntramolecular forcePolymer chemistryMoleculePolycyclic CompoundsSpectroscopyJournal of the American Society for Mass Spectrometry
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Solid–liquid extraction of ω-amino acids using ditopic receptors

2008

Abstract Five heteroditopic ligands have been prepared to be used in solid–liquid extraction of ω-amino acids into DMSO solutions. The prepared ligands contain crown ethers as cation binding sites and thiourea or amide groups for anion recognition. The aliphatic zone of the 1H NMR spectra suggests that two different species related to the amino acid are present in solution. One of these species is the complexed zwitterionic form and the other seems to be free non-zwitterionic amino acid. The presence of these two species allows extraction efficiencies higher than 100%.

chemistry.chemical_classificationCation bindingChemistryOrganic ChemistryExtraction (chemistry)BiochemistryIonAmino acidchemistry.chemical_compoundThioureaAmideDrug DiscoveryPolymer chemistryProton NMROrganic chemistrySolid phase extractionTetrahedron
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